Transcript: lnc-SMTN-2:1

Basic information

LNCipedia transcript ID: lnc-SMTN-2:1 
LNCipedia gene ID: lnc-SMTN-2
Location (hg38): chr22:31059989-31060283
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 295 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT084842
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.5107 non-coding 
CPAT coding probability 2.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMTN-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMTN-2:1
4.0 lnc-SMTN-2:1
4.1 lnc-SMTN-2:1
5.0 lnc-SMTN-2:1
5.1 lnc-OSBP2-2:31
5.2 lnc-SMTN-2:1