Transcript: lnc-SMUG1-9:3

Basic information

LNCipedia transcript ID: lnc-SMUG1-9:3 
LNCipedia gene ID: lnc-SMUG1-9
Location (hg38): chr12:54079029-54081318
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 796 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT028570
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.5769 non-coding 
CPAT coding probability 13.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SMUG1-9:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SMUG1-9:3
4.0 lnc-SMUG1-9:3
4.1 lnc-SMUG1-9:3
5.0 lnc-SMUG1-9:3
5.1 lnc-PPP1R1A-16:3
5.2 lnc-SMUG1-9:3