Transcript: lnc-SNAPC3-11:4

Basic information

LNCipedia transcript ID: lnc-SNAPC3-11:4 
LNCipedia gene ID: lnc-SNAPC3-11
Location (hg38): chr9:14317085-14358087
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1197 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT130244
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.3628 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNAPC3-11:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf146-2:5
4.0 lnc-C9orf146-2:5
4.1 lnc-C9orf146-2:5
5.0 lnc-C9orf146-2:5
5.1 lnc-RECK-201:8
5.2 lnc-SNAPC3-11:4