Transcript: lnc-SNAPC5-3:4

Basic information

LNCipedia transcript ID: lnc-SNAPC5-3:4 
LNCipedia gene ID: lnc-SNAPC5-3
Location (hg38): chr15:66499316-66499632
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 317 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT046794
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -178.4365 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNAPC5-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNAPC5-3:4
4.0 lnc-SNAPC5-3:4
4.1 lnc-SNAPC5-3:4
5.0 lnc-SNAPC5-3:4
5.1 lnc-TIPIN-7:4
5.2 lnc-SNAPC5-3:4