Transcript: lnc-SNN-6:5

Basic information

LNCipedia transcript ID: lnc-SNN-6:5 
LNCipedia gene ID: lnc-SNN-6
Location (hg38): chr16:11797524-11807379
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 9856 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000026649.1|HBMT00000535503.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.2102 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNN-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNN-6:5
5.0 lnc-SNN-6:5
5.1 lnc-PDXDC1-35:5
5.2 lnc-SNN-6:5