Transcript: lnc-SNRPN-10:2

Basic information

LNCipedia transcript ID: lnc-SNRPN-10:2 
LNCipedia gene ID: lnc-SNRPN-10
Ensembl Gene ID: ENSG00000270523
Ensembl Transcript ID: ENST00000605703
Location (hg38): chr15:25130978-25131337
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 360 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT041068; ENST00000605703.1
Alternative gene names: ENSG00000270523.1; RP11-145P16.3; AC124303.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.3452 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNRPN-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNURF-10:1
4.0 lnc-SNURF-10:1
4.1 lnc-SNURF-10:1
5.0 lnc-SNURF-10:1
5.1 lnc-SNRPN-10:1
5.2 lnc-SNRPN-10:2