Transcript: lnc-SNRPN-161:1
Basic information
LNCipedia transcript ID: lnc-SNRPN-161:1
LNCipedia gene ID: lnc-SNRPN-161
Location (hg38): chr15:25325764-25335501
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2022 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT041139
Alternative gene names:
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Available literature
- Kanduri (2016), Long noncoding RNAs: Lessons from genomic imprinting., Biochim. Biophys. Acta
- Wang (2015), Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer., Nucleic Acids Res.
- Zhao (2015), Identification of cancer-related lncRNAs through integrating genome, regulome and transcriptome features., Mol Biosyst
- Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther
- Murrell (2014), Cross-talk between imprinted loci in Prader-Willi syndrome., Nat. Genet.
- Stelzer (2014), The noncoding RNA IPW regulates the imprinted DLK1-DIO3 locus in an induced pluripotent stem cell model of Prader-Willi syndrome., Nat. Genet.
- Clark (2012), Genome-wide analysis of long noncoding RNA stability., Genome Res.
- Vitali (2010), Long nuclear-retained non-coding RNAs and allele-specific higher-order chromatin organization at imprinted snoRNA gene arrays., J. Cell. Sci.
- Runte (2001), The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A., Hum. Mol. Genet.
- Wevrick (1997), An imprinted mouse transcript homologous to the human imprinted in Prader-Willi syndrome (IPW) gene., Hum. Mol. Genet.
- Rachmilewitz (1996), Characterization of the imprinted IPW gene: allelic expression in normal and tumorigenic human tissues., Oncogene
- Wevrick (1994), Identification of a novel paternally expressed gene in the Prader-Willi syndrome region., Hum. Mol. Genet.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
3.1 | lnc-SNURF-1:64 |
4.0 | lnc-SNURF-1:64 |
4.1 | lnc-SNURF-1:64 |
5.0 | lnc-SNURF-1:64 |
5.1 | lnc-SNRPN-159:1 |
5.2 | lnc-SNRPN-161:1 |