Transcript: lnc-SNRPN-5:5

Basic information

LNCipedia transcript ID: lnc-SNRPN-5:5 
LNCipedia gene ID: lnc-SNRPN-5
Location (hg38): chr15:25865301-25869557
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 251 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023886; NONHSAT041158
Alternative gene names: XLOC_011188; linc-GABRA5-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -195.6457 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNRPN-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SNURF-5:3
3.1 lnc-SNURF-5:2
4.0 lnc-SNURF-5:2
4.1 lnc-SNURF-5:2
5.0 lnc-SNURF-5:2
5.1 lnc-SNRPN-23:4
5.2 lnc-SNRPN-5:5