Transcript: lnc-SNTG2-3:7

Basic information

LNCipedia transcript ID: lnc-SNTG2-3:7 
LNCipedia gene ID: lnc-SNTG2-3
Location (hg38): chr2:693386-697372
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 486 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233296.1|FTMT20700038279.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.0682 non-coding 
CPAT coding probability 8.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNTG2-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNTG2-3:7
5.0 lnc-SNTG2-3:7
5.1 lnc-SNX17-292:7
5.2 lnc-SNTG2-3:7