Transcript: lnc-SNX10-2:23

Basic information

LNCipedia transcript ID: lnc-SNX10-2:23 
LNCipedia gene ID: lnc-SNX10-2
Location (hg38): chr7:26398601-26494144
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 907 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214870.4|ENST00000421862.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -107.9435 non-coding 
CPAT coding probability 7.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX10-2:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNX10-2:23
5.0 lnc-SNX10-2:23
5.1 lnc-SNX10-10:9
5.2 lnc-SNX10-2:23