Transcript: lnc-SNX10-2:26

Basic information

LNCipedia transcript ID: lnc-SNX10-2:26 
LNCipedia gene ID: lnc-SNX10-2
Location (hg38): chr7:26398860-26502006
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6553 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214870.4|HBMT00001308963.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.692 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX10-2:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNX10-2:26
5.0 lnc-SNX10-2:26
5.1 lnc-SNX10-10:19
5.2 lnc-SNX10-2:26