Transcript: lnc-SNX20-8:4

Basic information

LNCipedia transcript ID: lnc-SNX20-8:4 
LNCipedia gene ID: lnc-SNX20-8
Location (hg38): chr16:50606076-50613681
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2466 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000205414.1|ENST00000379963.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -69.2144 non-coding 
CPAT coding probability 10.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX20-8:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNX20-8:4
5.0 lnc-SNX20-8:4
5.1 lnc-CFAP20-137:5
5.2 lnc-SNX20-8:4