Transcript: lnc-SNX8-3:1

Basic information

LNCipedia transcript ID: lnc-SNX8-3:1 
LNCipedia gene ID: lnc-SNX8-3
Location (hg38): chr7:2390160-2403292
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2447 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000094945.1|MICT00000317480.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.9951 non-coding 
CPAT coding probability 10.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SNX8-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SNX8-3:1
5.0 lnc-SNX8-3:1
5.1 lnc-GRIFIN-3:1
5.2 lnc-SNX8-3:1