Transcript: lnc-SOCS6-16:2

Basic information

LNCipedia transcript ID: lnc-SOCS6-16:2 
LNCipedia gene ID: lnc-SOCS6-16
Location (hg38): chr18:71810559-71833614
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 770 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT059803
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.3861 non-coding 
CPAT coding probability 2.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SOCS6-16:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SOCS6-16:2
4.0 lnc-SOCS6-16:2
4.1 lnc-SOCS6-16:2
5.0 lnc-SOCS6-16:2
5.1 lnc-KCNG2-80:2
5.2 lnc-SOCS6-16:2