Transcript: lnc-SOD1-7:2

Basic information

LNCipedia transcript ID: lnc-SOD1-7:2 
LNCipedia gene ID: lnc-SOD1-7
Location (hg38): chr21:31706555-31706864
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 310 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT081693
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.8109 non-coding 
CPAT coding probability 10.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SOD1-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SOD1-7:2
4.0 lnc-SOD1-7:2
4.1 lnc-SOD1-7:2
5.0 lnc-SOD1-7:2
5.1 lnc-OLIG1-21:2
5.2 lnc-SOD1-7:2