Transcript: lnc-SORBS3-1:6

Basic information

LNCipedia transcript ID: lnc-SORBS3-1:6 
LNCipedia gene ID: lnc-SORBS3-1
Location (hg38): chr8:22545186-22551165
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1982 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015252; NONHSAT125484
Alternative gene names: XLOC_006738; linc-SORBS3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.0578 non-coding 
CPAT coding probability 3.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SORBS3-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPP3CC-1:3
3.1 lnc-PPP3CC-1:3
4.0 lnc-SORBS3-1:6
4.1 lnc-SORBS3-1:6
5.0 lnc-SORBS3-1:6
5.1 lnc-RHOBTB2-28:5
5.2 lnc-SORBS3-1:6