Transcript: lnc-SORCS1-4:2

Basic information

LNCipedia transcript ID: lnc-SORCS1-4:2 
LNCipedia gene ID: lnc-SORCS1-4
Location (hg38): chr10:105660207-105820345
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 681 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT016252
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.8196 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SORCS1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SORCS1-4:2
4.0 lnc-SORCS1-4:2
4.1 lnc-SORCS1-4:2
5.0 lnc-SORCS1-4:2
5.1 lnc-BBIP1-57:4
5.2 lnc-SORCS1-4:2