Transcript: lnc-SORCS1-4:6

Basic information

LNCipedia transcript ID: lnc-SORCS1-4:6 
LNCipedia gene ID: lnc-SORCS1-4
RefSeq ID: NR_120625
Location (hg38): chr10:105673610-105820333
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 509 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120625; NR_120625.1
Alternative gene names: LOC101927549


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.8196 non-coding 
CPAT coding probability 3.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SORCS1-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SORCS1-4:6
4.0 lnc-SORCS1-4:6
4.1 lnc-SORCS1-4:6
5.0 lnc-SORCS1-4:6
5.1 lnc-BBIP1-57:5
5.2 lnc-SORCS1-4:6