Transcript: lnc-SORCS3-5:10

Basic information

LNCipedia transcript ID: lnc-SORCS3-5:10 
LNCipedia gene ID: lnc-SORCS3-5
RefSeq ID: NR_134330
Location (hg38): chr10:106140165-106188722
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 562 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134330.1
Alternative gene names: LOC105378470


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -74.8423 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SORCS3-5:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SMC3-48:3
5.1 lnc-SMC3-48:3
5.2 lnc-SORCS3-5:10