Transcript: lnc-SORCS3-5:9

Basic information

LNCipedia transcript ID: lnc-SORCS3-5:9 
LNCipedia gene ID: lnc-SORCS3-5
RefSeq ID: NR_134329
Location (hg38): chr10:106140165-106163754
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2095 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134329.1
Alternative gene names: LOC105378470


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -20.6965 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SORCS3-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SMC3-48:2
5.1 lnc-SMC3-48:2
5.2 lnc-SORCS3-5:9