Transcript: lnc-SORCS3-9:1

Basic information

LNCipedia transcript ID: lnc-SORCS3-9:1 
LNCipedia gene ID: lnc-SORCS3-9
Location (hg38): chr10:104556961-104575590
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 297 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_368_chr10:106316718-106335348_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 3.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SORCS3-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SORCS3-9:1
4.0 lnc-SORCS3-9:1
4.1 lnc-SORCS3-9:1
5.0 lnc-SORCS3-9:1
5.1 lnc-SMC3-60:1
5.2 lnc-SORCS3-9:1