Transcript: lnc-SOWAHB-5:11

Basic information

LNCipedia transcript ID: lnc-SOWAHB-5:11 
LNCipedia gene ID: lnc-SOWAHB-5
Location (hg38): chr4:76908177-76910121
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1000 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009076; NONHSAT097028
Alternative gene names: XLOC_003991; linc-ANKRD56-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.1569 non-coding 
CPAT coding probability 2.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SOWAHB-5:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANKRD56-1:1
3.1 lnc-ANKRD56-1:1
4.0 lnc-ANKRD56-1:1
4.1 lnc-ANKRD56-5:11
5.0 lnc-ANKRD56-5:11
5.1 lnc-NUP54-12:11
5.2 lnc-SOWAHB-5:11