Transcript: lnc-SOX8-2:2

Basic information

LNCipedia transcript ID: lnc-SOX8-2:2 
LNCipedia gene ID: lnc-SOX8-2
Location (hg38): chr16:921061-933198
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 247 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260439.1|FTMT26300023412.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 29.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SOX8-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LMF1-AS1:6
5.0 LMF1-AS1:6
5.1 lnc-DNASE1L2-127:2
5.2 lnc-SOX8-2:2