Transcript: lnc-SP3-10:1

Basic information

LNCipedia transcript ID: lnc-SP3-10:1 
LNCipedia gene ID: lnc-SP3-10
Location (hg38): chr2:174075190-174079351
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 722 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT075551
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 409.0108 coding 
CPAT coding probability 16.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SP3-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SP3-10:1
4.0 lnc-SP3-10:1
4.1 lnc-SP3-10:1
5.0 lnc-SP3-10:1
5.1 lnc-CHN1-18:1
5.2 lnc-SP3-10:1