Transcript: lnc-SP7-2:3

Basic information

LNCipedia transcript ID: lnc-SP7-2:3 
LNCipedia gene ID: lnc-SP7-2
Location (hg38): chr12:53307738-53309665
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 900 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT028446
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2101.5497 coding 
CPAT coding probability 26.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SP7-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SP7-2:3
4.0 lnc-SP7-2:3
4.1 lnc-SP7-2:3
5.0 lnc-SP7-2:3
5.1 lnc-SP7-2:3
5.2 lnc-SP7-2:3