Transcript: lnc-SPACA3-3:4

Basic information

LNCipedia transcript ID: lnc-SPACA3-3:4 
LNCipedia gene ID: lnc-SPACA3-3
Location (hg38): chr17:33563338-33572345
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1031 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT052984
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.9981 non-coding 
CPAT coding probability 11.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPACA3-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPACA3-3:4
4.0 lnc-SPACA3-3:4
4.1 lnc-SPACA3-3:4
5.0 lnc-SPACA3-3:4
5.1 lnc-NSRP1-92:1
5.2 lnc-SPACA3-3:4