Transcript: lnc-SPAG16-7:5

Basic information

LNCipedia transcript ID: lnc-SPAG16-7:5 
LNCipedia gene ID: lnc-SPAG16-7
Location (hg38): chr2:213151925-213155285
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2354 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270659.1|MICT00000206989.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -42.8515 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPAG16-7:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SPAG16-7:5
5.0 lnc-SPAG16-7:5
5.1 lnc-CPS1-30:3
5.2 lnc-SPAG16-7:5