Transcript: lnc-SPAG9-2:2

Basic information

LNCipedia transcript ID: lnc-SPAG9-2:2 
LNCipedia gene ID: lnc-SPAG9-2
Location (hg38): chr17:51249577-51251748
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2172 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT054750
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.3224 non-coding 
CPAT coding probability 22.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPAG9-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPAG9-2:2
4.0 lnc-SPAG9-2:2
4.1 lnc-SPAG9-2:2
5.0 lnc-SPAG9-2:2
5.1 lnc-ANKRD40-13:2
5.2 lnc-SPAG9-2:2