Transcript: lnc-SPANXB1-4:1

Basic information

LNCipedia transcript ID: lnc-SPANXB1-4:1 
LNCipedia gene ID: lnc-SPANXB1-4
Location (hg38): chrX:140789859-140793215
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3352 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT138823
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.3882 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPANXB1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP1-177G6.2.1-4:1
4.0 lnc-RP1-177G6.2.1-4:1
4.1 lnc-RP1-177G6.2.1-4:1
5.0 lnc-RP1-177G6.2.1-4:1
5.1 lnc-MAGEA11-114:1
5.2 lnc-SPANXB1-4:1