Transcript: lnc-SPANXB1-7:3

Basic information

LNCipedia transcript ID: lnc-SPANXB1-7:3 
LNCipedia gene ID: lnc-SPANXB1-7
Location (hg38): chrX:140723132-140725605
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1457 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT138806
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.9436 non-coding 
CPAT coding probability 99.65% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPANXB1-7:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPANXB2-2:3
4.0 lnc-SPANXB2-2:3
4.1 lnc-SPANXB2-2:3
5.0 lnc-SPANXB2-2:3
5.1 lnc-MAGEA11-117:3
5.2 lnc-SPANXB1-7:3