Transcript: lnc-SPARC-2:2

Basic information

LNCipedia transcript ID: lnc-SPARC-2:2 
LNCipedia gene ID: lnc-SPARC-2
Location (hg38): chr5:151742823-151758649
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 317 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT104629
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score 319.6693 coding 
CPAT coding probability 7.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPARC-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPARC-2:2
4.0 lnc-SPARC-2:2
4.1 lnc-SPARC-2:2
5.0 lnc-SPARC-2:2
5.1 lnc-FAXDC2-22:1
5.2 lnc-SPARC-2:2