Transcript: lnc-SPATA1-7:1

Basic information

LNCipedia transcript ID: lnc-SPATA1-7:1 
LNCipedia gene ID: lnc-SPATA1-7
Ensembl Gene ID: ENSG00000285374
Ensembl Transcript ID: ENST00000644179
Location (hg38): chr1:84607099-84610697
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1060 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000644179.1
Alternative gene names: ENSG00000285374.1; AL359762.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.0986 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA1-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SAMD13-7:1
5.1 lnc-SAMD13-7:1
5.2 lnc-SPATA1-7:1