Transcript: lnc-SPATA19-1:8

Basic information

LNCipedia transcript ID: lnc-SPATA19-1:8 
LNCipedia gene ID: lnc-SPATA19-1
Location (hg38): chr11:133908999-133912879
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1273 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000530957
Alternative gene names: ENSG00000254918; RP11-259P6.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -96.9698 non-coding 
CPAT coding probability 1.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA19-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-259P6.1.1-1:1
3.1 lnc-RP11-259P6.1.1-1:1
4.0 lnc-RP11-259P6.1.1-1:1
4.1 lnc-RP11-259P6.1.1-1:1
5.0 lnc-RP11-259P6.1.1-1:1
5.1 lnc-NCAPD3-7:1
5.2 lnc-SPATA19-1:8