Transcript: lnc-SPATA19-9:6

Basic information

LNCipedia transcript ID: lnc-SPATA19-9:6 
LNCipedia gene ID: lnc-SPATA19-9
Location (hg38): chr11:133783671-133810170
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 948 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT025213
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.9257 non-coding 
CPAT coding probability 3.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA19-9:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPATA19-1:7
4.0 lnc-SPATA19-1:7
4.1 lnc-SPATA19-1:7
5.0 lnc-SPATA19-1:7
5.1 lnc-IGSF9B-7:6
5.2 lnc-SPATA19-9:6