Transcript: lnc-SPATA21-6:1

Basic information

LNCipedia transcript ID: lnc-SPATA21-6:1 
LNCipedia gene ID: lnc-SPATA21-6
Location (hg38): chr1:16490646-16499257
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 255 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT001126
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 83.23% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPATA21-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPATA21-4:1
4.0 lnc-SPATA21-6:1
4.1 lnc-SPATA21-6:1
5.0 lnc-SPATA21-6:1
5.1 lnc-LRRC38-41:2
5.2 lnc-SPATA21-6:1