Transcript: lnc-SPATA21-6:2

Basic information

LNCipedia transcript ID: lnc-SPATA21-6:2 
LNCipedia gene ID: lnc-SPATA21-6
Location (hg38): chr1:16490634-16499257
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 574 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT001125
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -422.4637 non-coding 
CPAT coding probability 97.21% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPATA21-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPATA21-4:2
4.0 lnc-SPATA21-6:2
4.1 lnc-SPATA21-6:2
5.0 lnc-SPATA21-6:2
5.1 lnc-LRRC38-41:1
5.2 lnc-SPATA21-6:2