Transcript: lnc-SPATA31D1-4:28

Basic information

LNCipedia transcript ID: lnc-SPATA31D1-4:28 
LNCipedia gene ID: lnc-SPATA31D1-4
Location (hg38): chr9:82273459-82405263
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 464 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000628925.2
Alternative gene names: ENSG00000228430.8; RP11-15B24.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -140.3844 non-coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA31D1-4:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM75D1-4:22
4.1 lnc-FAM75D1-4:22
5.0 lnc-FAM75D1-4:22
5.1 lnc-SECISBP2-89:28
5.2 lnc-SPATA31D1-4:28