Transcript: lnc-SPATA31D1-4:4

Basic information

LNCipedia transcript ID: lnc-SPATA31D1-4:4 
LNCipedia gene ID: lnc-SPATA31D1-4
Location (hg38): chr9:82273403-82273815
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 413 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228430.4|MICT00000361017.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -291.7026 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA31D1-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM75D1-4:26
5.0 lnc-FAM75D1-4:26
5.1 lnc-SECISBP2-89:4
5.2 lnc-SPATA31D1-4:4