Transcript: lnc-SPATA32-1:1

Basic information

LNCipedia transcript ID: lnc-SPATA32-1:1 
LNCipedia gene ID: lnc-SPATA32-1
Location (hg38): chr17:45237008-45241957
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3196 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT054042
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 137.0556 coding 
CPAT coding probability 91.23% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPATA32-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf46-1:2
4.0 lnc-C17orf46-1:2
4.1 lnc-C17orf46-1:2
5.0 lnc-C17orf46-1:2
5.1 lnc-GFAP-20:1
5.2 lnc-SPATA32-1:1