Transcript: lnc-SPATA32-2:14

Basic information

LNCipedia transcript ID: lnc-SPATA32-2:14 
LNCipedia gene ID: lnc-SPATA32-2
Location (hg38): chr17:45218270-45221765
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1556 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT054033
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.1024 non-coding 
CPAT coding probability 61.20% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPATA32-2:14 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf46-2:4
4.0 lnc-C17orf46-2:4
4.1 lnc-C17orf46-2:4
5.0 lnc-C17orf46-2:4
5.1 lnc-GFAP-19:14
5.2 lnc-SPATA32-2:14