Transcript: lnc-SPC25-2:1

Basic information

LNCipedia transcript ID: lnc-SPC25-2:1 
LNCipedia gene ID: lnc-SPC25-2
Location (hg38): chr2:168969523-168970591
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 576 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT075344
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -98.5511 non-coding 
CPAT coding probability 48.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPC25-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPC25-2:1
4.0 lnc-SPC25-2:1
4.1 lnc-SPC25-2:1
5.0 lnc-SPC25-2:1
5.1 lnc-LRP2-2:1
5.2 lnc-SPC25-2:1