Transcript: lnc-SPDYE6-7:2

Basic information

LNCipedia transcript ID: lnc-SPDYE6-7:2 
LNCipedia gene ID: lnc-SPDYE6-7
Location (hg38): chr7:102188599-102188828
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 230 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT122481
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPDYE6-7:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALKBH4-7:1
4.0 lnc-ALKBH4-7:1
4.1 lnc-ALKBH4-7:1
5.0 lnc-ALKBH4-7:1
5.1 lnc-SPDYE6-7:1
5.2 lnc-SPDYE6-7:2