Transcript: lnc-SPON2-1:11

Basic information

LNCipedia transcript ID: lnc-SPON2-1:11 
LNCipedia gene ID: lnc-SPON2-1
Location (hg38): chr4:1179448-1191322
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 872 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT094676
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.0308 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPON2-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC092535.1-1:10
4.0 lnc-SPON2-1:11
4.1 lnc-SPON2-1:11
5.0 lnc-SPON2-1:11
5.1 lnc-PSAPL1-90:10
5.2 lnc-SPON2-1:11