Transcript: lnc-SPPL3-3:1

Basic information

LNCipedia transcript ID: lnc-SPPL3-3:1 
LNCipedia gene ID: lnc-SPPL3-3
Location (hg38): chr12:120696314-120703825
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5785 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT031191
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 104.1395 coding 
CPAT coding probability 11.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SPPL3-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPPL3.1-3:3
4.0 lnc-SPPL3.1-3:3
4.1 lnc-SPPL3.1-3:3
5.0 lnc-SPPL3.1-3:3
5.1 lnc-SRSF9-8:1
5.2 lnc-SPPL3-3:1