Transcript: lnc-SPRED2-19:2

Basic information

LNCipedia transcript ID: lnc-SPRED2-19:2 
LNCipedia gene ID: lnc-SPRED2-19
Location (hg38): chr2:66548597-66556718
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2496 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_1853_chr2:66775728-66783850_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.5402 non-coding 
CPAT coding probability 5.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPRED2-19:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPRED2-19:2
4.0 lnc-SPRED2-19:2
4.1 lnc-SPRED2-19:2
5.0 lnc-SPRED2-19:2
5.1 lnc-GKN2-51:2
5.2 lnc-SPRED2-19:2