Transcript: lnc-SPRY1-12:2

Basic information

LNCipedia transcript ID: lnc-SPRY1-12:2 
LNCipedia gene ID: lnc-SPRY1-12
Location (hg38): chr4:124027926-124028291
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 262 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008230; NONHSAT098210
Alternative gene names: XLOC_003682; linc-FAT4-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.5139 non-coding 
CPAT coding probability 2.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPRY1-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SPRY1-3:1
3.1 lnc-SPRY1-3:1
4.0 lnc-SPRY1-3:1
4.1 lnc-SPRY1-3:1
5.0 lnc-SPRY1-3:1
5.1 lnc-FGF2-12:2
5.2 lnc-SPRY1-12:2