Transcript: lnc-SPRYD3-1:15

Basic information

LNCipedia transcript ID: lnc-SPRYD3-1:15 
LNCipedia gene ID: lnc-SPRYD3-1
Ensembl Gene ID: ENSG00000257337
Ensembl Transcript ID: ENST00000607643
Location (hg38): chr12:53042705-53046003
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 662 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607643.1
Alternative gene names: ENSG00000257337.2; RP11-983P16.4; ENSG00000257337.6; AC068888.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -156.9469 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPRYD3-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPRYD3-1:15
4.0 lnc-SPRYD3-1:15
4.1 lnc-SPRYD3-1:15
5.0 lnc-SPRYD3-1:15
5.1 lnc-SPRYD3-1:15
5.2 lnc-SPRYD3-1:15