Transcript: lnc-SPSB1-1:1

Basic information

LNCipedia transcript ID: lnc-SPSB1-1:1 
LNCipedia gene ID: lnc-SPSB1-1
Location (hg38): chr1:9452284-9452818
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 424 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT000809; FPKM1_group_88_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -138.6426 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPSB1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SPSB1-1:1
4.0 lnc-SPSB1-1:1
4.1 lnc-SPSB1-1:1
5.0 lnc-SPSB1-1:1
5.1 lnc-SLC25A33-3:1
5.2 lnc-SPSB1-1:1