Transcript: lnc-SPTY2D1OS-4:1

Basic information

LNCipedia transcript ID: lnc-SPTY2D1OS-4:1 
LNCipedia gene ID: lnc-SPTY2D1OS-4
Location (hg38): chr11:18634588-18635944
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1357 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000001676.1|FTMT24400000772.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.5336 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPTY2D1OS-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM86A-4:2
5.0 lnc-TMEM86A-4:2
5.1 lnc-KCNC1-16:1
5.2 lnc-SPTY2D1OS-4:1