Transcript: lnc-SRCIN1-1:24

Basic information

LNCipedia transcript ID: lnc-SRCIN1-1:24 
LNCipedia gene ID: lnc-SRCIN1-1
Location (hg38): chr17:38450626-38451910
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 383 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260833.2|ENST00000582919.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -310.3295 non-coding 
CPAT coding probability 2.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SRCIN1-1:24 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SRCIN1-1:24
5.0 lnc-SRCIN1-1:24
5.1 lnc-SRCIN1-1:24
5.2 lnc-SRCIN1-1:24